PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW17112.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family HD-ZIP
Protein Properties Length: 173aa    MW: 19656.4 Da    PI: 7.2689
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW17112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.81.6e-1774126456
                 -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 + +++ eq+++Le+ Fe  + +  e++ +LA+ lgL  rqV +WFqNrRa++k
  RWW17112.1  74 KKRLNIEQVRTLERNFELGNRLEPERKMQLARVLGLRPRQVAIWFQNRRARWK 126
                 4568889*********************************************9 PP
2HD-ZIP_I/II122.42.3e-3972163192
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  ekk+rl+ eqv++LE++Fe  ++LeperK++lar Lgl+prqva+WFqnrRAR+ktkqlEk+y++Lkr+++a k+ene+L+ ++++L++e++
   RWW17112.1  72 EKKKRLNIEQVRTLERNFELGNRLEPERKMQLARVLGLRPRQVAIWFQNRRARWKTKQLEKEYDVLKRQLEATKTENEALQVQNKKLQAEVS 163
                  69**************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MACNGMASSS SFPSNFMMQT HCGEENQLGI PVSPLLLANL QDLGGESFPG IETRDEMTAD  60
DDLSDDGLPA GEKKKRLNIE QVRTLERNFE LGNRLEPERK MQLARVLGLR PRQVAIWFQN  120
RRARWKTKQL EKEYDVLKRQ LEATKTENEA LQVQNKKLQA EVSLSSMKIS SSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121129RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.12e-61HD-ZIP family protein