PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW17557.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NAC

Protein Properties

Length: 412aa MW: 46027.2 Da PI: 8.4802

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW17557.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	142	3.4e-44	194	329	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvka...eekewyfFskrdkkyatgkrknratksgyWk.atgkdk 90 lppGfrFhPtdeelvv+yL++kv + +l++ ++i+e+++ k++PwdLp + + e y F r+ ky++g+ +nra++sgyWk at kd+ RWW17557.1 194 LPPGFRFHPTDEELVVQYLRRKVFSCPLPA-SIIPEINLAKLDPWDLPGefseiS--VllvVHPERYCFNLREAKYRNGSWSNRAARSGYWKkATRKDE 289 79**************************.89***********5355441..144355699*********************978999 PP NAM 91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++s ++++vg+kk+Lvfy+g+ p+g+ktdWvmheyrl RWW17557.1 290 QITSPrcSSQVVGMKKVLVFYRGKPPTGTKTDWVMHEYRL 329 *99888999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MSRVTHDYST LSGTINQHLG GAVNLPRQQG AENPPRSTLA PLPHLSTPGF LWSGKPDAVL 60 RSICHCFGEI HHLKSHEWLF PHMSFSLSTF DPSVGTISGQ TTSSSGTPLR VHWEGLMKGQ 120 QLWEEAKAAT TYYQGSLSPA LAGLVYRWPL GVRSVQLGSD LELGEKGRPP CCLLSRFTHM 180 ESKPSFLRHG VLRLPPGFRF HPTDEELVVQ YLRRKVFSCP LPASIIPEIN LAKLDPWDLP 240 GEFSEISVLL VVHPERYCFN LREAKYRNGS WSNRAARSGY WKKATRKDEQ ITSPRCSSQV 300 VGMKKVLVFY RGKPPTGTKT DWVMHEYRLA GTDGDWVLCR IFQKKRATKM DVETEGDDEL 360 PVTNSGIGFI DLMGRRDRDQ NHSSSLSESS CITELSDGSS NGEETSSRSS IP

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MSRVTHDYST LSGTINQHLG GAVNLPRQQG AENPPRSTLA PLPHLSTPGF LWSGKPDAVL  60
RSICHCFGEI HHLKSHEWLF PHMSFSLSTF DPSVGTISGQ TTSSSGTPLR VHWEGLMKGQ  120
QLWEEAKAAT TYYQGSLSPA LAGLVYRWPL GVRSVQLGSD LELGEKGRPP CCLLSRFTHM  180
ESKPSFLRHG VLRLPPGFRF HPTDEELVVQ YLRRKVFSCP LPASIIPEIN LAKLDPWDLP  240
GEFSEISVLL VVHPERYCFN LREAKYRNGS WSNRAARSGY WKKATRKDEQ ITSPRCSSQV  300
VGMKKVLVFY RGKPPTGTKT DWVMHEYRLA GTDGDWVLCR IFQKKRATKM DVETEGDDEL  360
PVTNSGIGFI DLMGRRDRDQ NHSSSLSESS CITELSDGSS NGEETSSRSS IP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	2e-63	NAC family protein