PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW17622.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SRS

Protein Properties

Length: 329aa MW: 34086.7 Da PI: 7.7805

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW17622.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	217.2	3.7e-67	92	260	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.....................aeaaskrkrelks 80 g++sCqdCGnqakkdC+h+RCR CCksrgf+C thvkstWvpaakrrerqqql+a+++ +++s+ + skr re RWW17622.1 92 GGGMSCQDCGNQAKKDCSHMRCRSCCKSRGFQCPTHVKSTWVPAAKRRERQQQLSATAALQQQSRrlqiggsttaaltrggggddsGGEPSKRAREI-- 188 5789**********************************************999887777766668899888888877777543222333333332.. PP DUF702 81 kkqsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++ ++ t++ss+ + s+P+evss+avfrcvrvs +dd+e+e+aYqtavsigGhvf+GiLydqG+++ RWW17622.1 189 VTRLPTAITTTSSG--GDRTAGVSFPAEVSSPAVFRCVRVSPMDDAEDEFAYQTAVSIGGHVFRGILYDQGPDA 260 22333333333333..34456667**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MAGFSLGGGS RQGGGDEGIP PESLFLYGSG SGGGGGSRTE EITTYTRGFE LWQQHQHLYT 60 STTAGLLSFS DEPLHAGGTI GPTLSMRGSG GGGGMSCQDC GNQAKKDCSH MRCRSCCKSR 120 GFQCPTHVKS TWVPAAKRRE RQQQLSATAA LQQQSRRLQI GGSTTAALTR GGGGDDSGGE 180 PSKRAREIVT RLPTAITTTS SGGDRTAGVS FPAEVSSPAV FRCVRVSPMD DAEDEFAYQT 240 AVSIGGHVFR GILYDQGPDA QYPFHGDQPS SSTAAAAIAT ATAAAFATNL TAAPPTSSTA 300 GLLDPAALYP TPLSSFMAGT QFFPHHPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	4e-57	SRS family protein