PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW17645.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MIKC_MADS
Protein Properties Length: 147aa    MW: 16943.4 Da    PI: 9.518
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW17645.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF101.53.2e-32958150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gklye+ 
  RWW17645.1  9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 58
                79**********************************************95 PP
2K-box14.41.5e-0690118937
       K-box   9 leeakaeslqqelakLkkeienLqreqRh 37 
                 + ea+  s++qe++kL  + e+Lqr+qR 
  RWW17645.1  90 NGEAQVCSWYQEMSKLTVKFESLQRSQRL 118
                 6788899*******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSW  60
ITLTLSCRTS KTLERYQRCC YTPQDPNVAN GEAQVCSWYQ EMSKLTVKFE SLQRSQRLLS  120
FSVIFAVLEH LHSVNDGQDG RTPEESK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.13e-42MIKC_MADS family protein