PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW17842.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SBP

Protein Properties

Length: 403aa MW: 44372.6 Da PI: 9.2979

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW17842.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.8	2.1e-40	114	190	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC++dl++ak+yhr+h+vCe hsk+p+v+v+g+e+rfCqqCsrfh lsefD++krsCrrrL++hn+rrrk+q+ RWW17842.1 114 CQVEGCDVDLTTAKDYHRKHRVCECHSKSPKVIVAGRERRFCQQCSRFHGLSEFDQKKRSCRRRLSDHNARRRKPQP 190 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MGICNGFVCS SGGGASSVLE LGNRSSKSSI SASIDSLSKA EKGNSDFNYD SAERAVNSSS 60 KIILARVEGF GTSSVPLAAG HPKEPVTGLK LGRTFFEDAK KSRISPQNLQ NPKCQVEGCD 120 VDLTTAKDYH RKHRVCECHS KSPKVIVAGR ERRFCQQCSR FHGLSEFDQK KRSCRRRLSD 180 HNARRRKPQP ATISFSSSRL SSSYYDDRHH MNLVFGGNPL YHVTTDSPLE DDPSSFKLIQ 240 PKDSWIKSNK AGDINEQLQF SSTCQTHNIS TLHHDLNRLL PFKGTTAEVL NQGLEVPVFA 300 SSLGGAPDLR RALSLLSNNS WSSANPGPSS NVKFVNTKNT NAAHPAVDTV DSTAGFLQVE 360 QPIRPQSTML PLFNLQNHNG QFQEFQLLKS PYQASFFDST QIH

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MGICNGFVCS SGGGASSVLE LGNRSSKSSI SASIDSLSKA EKGNSDFNYD SAERAVNSSS  60
KIILARVEGF GTSSVPLAAG HPKEPVTGLK LGRTFFEDAK KSRISPQNLQ NPKCQVEGCD  120
VDLTTAKDYH RKHRVCECHS KSPKVIVAGR ERRFCQQCSR FHGLSEFDQK KRSCRRRLSD  180
HNARRRKPQP ATISFSSSRL SSSYYDDRHH MNLVFGGNPL YHVTTDSPLE DDPSSFKLIQ  240
PKDSWIKSNK AGDINEQLQF SSTCQTHNIS TLHHDLNRLL PFKGTTAEVL NQGLEVPVFA  300
SSLGGAPDLR RALSLLSNNS WSSANPGPSS NVKFVNTKNT NAAHPAVDTV DSTAGFLQVE  360
QPIRPQSTML PLFNLQNHNG QFQEFQLLKS PYQASFFDST QIH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	170	187	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	9e-48	SBP family protein