PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW18043.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 254aa MW: 27934.9 Da PI: 9.3966

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW18043.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	133.7	7.4e-42	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC+++C++ap+fp +qp+kfa vh++FGasnv kllk+l++e+reda+ sl yeAear+rdPv+G+vg i lq++l++++++l+ +k+ RWW18043.1 7 PCAACKLLRRKCTPECIFAPHFPPDQPAKFAKVHRVFGASNVAKLLKQLRPEQREDAVVSLSYEAEARLRDPVHGCVGYIYLLQHKLKEVQHDLSNAKR 105 7*********************************************************************************************99987 PP DUF260 100 e 100 e RWW18043.1 106 E 106 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MSSSSSPCAA CKLLRRKCTP ECIFAPHFPP DQPAKFAKVH RVFGASNVAK LLKQLRPEQR 60 EDAVVSLSYE AEARLRDPVH GCVGYIYLLQ HKLKEVQHDL SNAKRELSTY IGPVAFGPNL 120 PHHQLQGVSP SPYGIRGMGL GTGLALPAPA TWPQGQMVIM SEQHQHQRQQ MPEMHQAAVE 180 TPVTAREQEM LTSYPQIQGY DRMAGGAAVV ATVSAQLFNS PFAAQQRHPQ PQQYAERLWA 240 KARGEGRSGV NPSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	4e-62	LBD family protein