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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW18074.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | MYB_related | ||||||||
| Protein Properties | Length: 154aa MW: 17816.9 Da PI: 9.3088 | ||||||||
| Description | MYB_related family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 29.1 | 2.4e-09 | 2 | 24 | 22 | 46 |
T-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqk 46
+ W++Iar ++ gRt++++k++w++
RWW18074.1 2 R-WSKIARQLP-GRTDNEIKNYWRT 24
4.*********.***********96 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 154 aa Download sequence |
MRWSKIARQL PGRTDNEIKN YWRTRIQKRV KQSDSPEFQN AILIDEANNS TSQTQIADAG 60 RVQPSRPDEP TIMNTVGIEP QFSTDSNDFF WTFEELWCRK TTMEPTGLIE HVHAEDRSTS 120 GPQLLIATST WRRRRHLMPV ENRSHGRGVP GHGF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G27810.1 | 1e-14 | MYB family protein | ||||




