PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW18268.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 705aa MW: 75847.5 Da PI: 5.7108

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW18268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.5	2e-12	523	568	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L Av YI +L RWW18268.1 523 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLADAVTYIEEL 568 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MNLWSDDNTS VMEAFMASTD LQGFSWAPPP TPPPPSTAAS SLDPVRAVRG PAPPAAAQQT 60 PTAPAYLSQE TLQQRLQTLI EGARESWTYG IFWQSSVDAA TGASCLGWGD GYYKGCEEDK 120 RKQRPTAAAS PAEQEYRKRV LRELHSLISG GGSSGMDEAV EDEVTDTEWF FLVSMTQSFV 180 NGAGLAGEAL YAGEPSWVAG ASRLAAAPCQ RAHQAQLLGI QTMVCVPVGS GVLELGSTDV 240 IFHSPEIMGK IRVLFNFDSP DAPTSSAAAA APPSSLALQS ALGTPAADRG ETDPSVLWLT 300 DPSAVEIKDS VSLLSTTADM SVTKPPIQFG NKASSSNLTE NPSSSIHTQK SPNHQQQHRS 360 GCSKPQNQSN FSKDLNSSEL ASNDSVAPQS FERESGNILN FAGGKRNSSP APATGSLFFH 420 RPVAAAATVD DKKNTRSTGA TSRASNNNDE GMLSFTSTPV RPLPNGQRNS SGGGGVILDG 480 ADSDQSDLVA SVREVESSQV VEPEKRPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY 540 ALRAVVPNVS KMDKASLLAD AVTYIEELRS NLQALEAEGE ELQAQVEALE KQRDSGPARR 600 SPTAQHEQMV NDRGSRCHGV EMEVKILGME AMVRIQCERR NHPAARLMIA LQELGVEVHY 660 ASVSVVKDLM IQQATVKMSP SRVYTQEQLN AALYSRLAAE APVRR

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MNLWSDDNTS VMEAFMASTD LQGFSWAPPP TPPPPSTAAS SLDPVRAVRG PAPPAAAQQT  60
PTAPAYLSQE TLQQRLQTLI EGARESWTYG IFWQSSVDAA TGASCLGWGD GYYKGCEEDK  120
RKQRPTAAAS PAEQEYRKRV LRELHSLISG GGSSGMDEAV EDEVTDTEWF FLVSMTQSFV  180
NGAGLAGEAL YAGEPSWVAG ASRLAAAPCQ RAHQAQLLGI QTMVCVPVGS GVLELGSTDV  240
IFHSPEIMGK IRVLFNFDSP DAPTSSAAAA APPSSLALQS ALGTPAADRG ETDPSVLWLT  300
DPSAVEIKDS VSLLSTTADM SVTKPPIQFG NKASSSNLTE NPSSSIHTQK SPNHQQQHRS  360
GCSKPQNQSN FSKDLNSSEL ASNDSVAPQS FERESGNILN FAGGKRNSSP APATGSLFFH  420
RPVAAAATVD DKKNTRSTGA TSRASNNNDE GMLSFTSTPV RPLPNGQRNS SGGGGVILDG  480
ADSDQSDLVA SVREVESSQV VEPEKRPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY  540
ALRAVVPNVS KMDKASLLAD AVTYIEELRS NLQALEAEGE ELQAQVEALE KQRDSGPARR  600
SPTAQHEQMV NDRGSRCHGV EMEVKILGME AMVRIQCERR NHPAARLMIA LQELGVEVHY  660
ASVSVVKDLM IQQATVKMSP SRVYTQEQLN AALYSRLAAE APVRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	505	513	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-124	bHLH family protein