PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW18295.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 531aa MW: 59862.4 Da PI: 8.2821

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW18295.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.0002	437	459	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ RWW18295.1 437 FMCRKCGKAFAVRGDWRTHEKNC 459 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MAIEKSCGGL HQFATDHCSW ASLRLMARGR KTLKRLCYRH NSHSGVCWDR KSACNLRQAS 60 PDDMETGVVS LLTLLQCFYP CYSGNAIASV WGEEEERRKE RAAVLWKRRE LWLRPRLSSS 120 VSKADRGRLL FFPFPRSPPP PSSSPLLLGS YNRVQPWRTP SEFQAPTMAE DPYTSYFKGY 180 LGRCTFPSTF PSSLPPTTHS FYANFTNYAT PHFQPSPPSP PLREALPLLS LSPTRHHRQQ 240 QQQQQRQEEG EDPSCSAFEE AEGDATVGYE KNNMEVETVS VALHIGLPSP SEADLISRIS 300 STSVDDDKES EEDGGGGGGS DAIPLGHPTV GKLTRGQYWI PTLSQILIGP TQFSCPVCCK 360 TFNRYNNMQM HMWGHGSQYR KGPESLRGTQ PTAMLRLPCY CCAPGCRNNI DHPRSRPLKD 420 FRTLQTHYKR KHGIKPFMCR KCGKAFAVRG DWRTHEKNCG KLWYCACGSD FKHKRSLKDH 480 IRAFGSGHAA YGIDCFDEDD EPSSEIEQDC DPHQQQVQVQ VQQHSQSGYM G

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MAIEKSCGGL HQFATDHCSW ASLRLMARGR KTLKRLCYRH NSHSGVCWDR KSACNLRQAS  60
PDDMETGVVS LLTLLQCFYP CYSGNAIASV WGEEEERRKE RAAVLWKRRE LWLRPRLSSS  120
VSKADRGRLL FFPFPRSPPP PSSSPLLLGS YNRVQPWRTP SEFQAPTMAE DPYTSYFKGY  180
LGRCTFPSTF PSSLPPTTHS FYANFTNYAT PHFQPSPPSP PLREALPLLS LSPTRHHRQQ  240
QQQQQRQEEG EDPSCSAFEE AEGDATVGYE KNNMEVETVS VALHIGLPSP SEADLISRIS  300
STSVDDDKES EEDGGGGGGS DAIPLGHPTV GKLTRGQYWI PTLSQILIGP TQFSCPVCCK  360
TFNRYNNMQM HMWGHGSQYR KGPESLRGTQ PTAMLRLPCY CCAPGCRNNI DHPRSRPLKD  420
FRTLQTHYKR KHGIKPFMCR KCGKAFAVRG DWRTHEKNCG KLWYCACGSD FKHKRSLKDH  480
IRAFGSGHAA YGIDCFDEDD EPSSEIEQDC DPHQQQVQVQ VQQHSQSGYM G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-123	C2H2 family protein