PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW18420.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NAC

Protein Properties

Length: 358aa MW: 40472.6 Da PI: 9.1361

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW18420.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	111.9	7.3e-35	46	188	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyW 83 lp+G++F+Ptd+el+ e+L++kv+++ ++++ i+ +i++++P++Lp + + + + +fF++ +k+y+tg+rk+r+ + +W RWW18420.1 46 LPAGVKFDPTDQELI-EHLEAKVRAEGsrshplIDEFIPtIEGEdGICYTHPEKLPGA-TRDGLSKHFFHRPSKAYTTGTRKRRKiqsesdiqRGETRW 142 799**********.99*99986676553333333666646******44.4455689***************85666664433778 PP NAM 84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++tgk+++v++ +g+++g+kk+Lv+y g+++k++kt+W+mh+y+l RWW18420.1 143 HKTGKTRPVVV-NGTQKGCKKILVLYtnFGKHRKPVKTNWIMHQYHL 188 *********.999*******5447999**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MNSSSVGSVS SSSLIDAKLR EHPACGSIQC PSCGHKLDRN LDWVGLPAGV KFDPTDQELI 60 EHLEAKVRAE GSRSHPLIDE FIPTIEGEDG ICYTHPEKLP GATRDGLSKH FFHRPSKAYT 120 TGTRKRRKIQ SESDIQRGET RWHKTGKTRP VVVNGTQKGC KKILVLYTNF GKHRKPVKTN 180 WIMHQYHLGE LEEEKDGELV VSKVFYQTQP RQWSGKSAAA AVEGMSQRRD SEGLSKRDEF 240 LDSQHVKPDN FSFAPFPEGF SEVISPQAFV AVGEVSDEHA EHGRHVRPPP PYHHVARQQQ 300 QQWRMATATA GFHSRRPPMN PFSKFVSTPL PQTSIVLEEP YQVPRMLLQP DKFQVWQS

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MNSSSVGSVS SSSLIDAKLR EHPACGSIQC PSCGHKLDRN LDWVGLPAGV KFDPTDQELI  60
EHLEAKVRAE GSRSHPLIDE FIPTIEGEDG ICYTHPEKLP GATRDGLSKH FFHRPSKAYT  120
TGTRKRRKIQ SESDIQRGET RWHKTGKTRP VVVNGTQKGC KKILVLYTNF GKHRKPVKTN  180
WIMHQYHLGE LEEEKDGELV VSKVFYQTQP RQWSGKSAAA AVEGMSQRRD SEGLSKRDEF  240
LDSQHVKPDN FSFAPFPEGF SEVISPQAFV AVGEVSDEHA EHGRHVRPPP PYHHVARQQQ  300
QQWRMATATA GFHSRRPPMN PFSKFVSTPL PQTSIVLEEP YQVPRMLLQP DKFQVWQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-112	NAC family protein