PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW18589.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 698aa MW: 77143.4 Da PI: 5.9738

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW18589.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	79.3	6e-25	31	89	2	60
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 Fl+k+ye+++d++++ ++sw +nsfvv++++efa+++LpkyFkh+nf+SFvRQLn+Y RWW18589.1 31 FLSKTYEMVDDPATDAIVSWGPANNSFVVWNTTEFARDLLPKYFKHNNFSSFVRQLNTY 89 9******************999********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
MDGVGGEGGG AQKAAATTAN ASLNGGAPPP FLSKTYEMVD DPATDAIVSW GPANNSFVVW 60 NTTEFARDLL PKYFKHNNFS SFVRQLNTYV ALRRHSGVTL YDPKSFTTVI WLVEVIAFNQ 120 LNIRKSRSHC RILVLDMSFL YHVDPRETCV YITYQGLCKS QHETSRITFD TVWVLFLASQ 180 NPFNELPNVA TTEATNGDVV GGASFKGVRW WRRKLQSSPS TVEGAAHGSS RGGRKLQTKA 240 RSSDPFIDNI GSLAEAALES INGGGKRLGG VSLKRIAWST LEGFRKVDPD QWEFANEGFL 300 RGQKHLLKNI SRRKSTHPHN QQQQPQTQSS IEVGKFGLEE EIERLKRDKN VLMQELVRLR 360 QQQQATDQQL NTLGQRLQGM EQRQQQMMSF LAKAMQSPGF LAQLVQQNDS NRRIVGVSKK 420 RRLPRQENKE DGESAVHDGQ IIKYQPLINE AAKAMLMQIL KFDTSPRLES FGNSQNLLLE 480 NFSSPMEAFD GRSSLKRISG VTLSEVPTSM GFPSLPTNSG YSTMHSSVPS DIQSSSVVAD 540 MVATTEMPSM NTGAGSVAPS HSANGMLKLS EGQSAMPNGL HSFVGPTGGN IPMNREIMDE 600 LAGIDTEKFS FDTDVDILND DEKLPSINDP FWEQFLTASP LLGDSEEVDS GIHETEEMTL 660 ESGDDDWDSS RNMDHLTEQM GHLTSETNRH ACPSELGG

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

MDGVGGEGGG AQKAAATTAN ASLNGGAPPP FLSKTYEMVD DPATDAIVSW GPANNSFVVW  60
NTTEFARDLL PKYFKHNNFS SFVRQLNTYV ALRRHSGVTL YDPKSFTTVI WLVEVIAFNQ  120
LNIRKSRSHC RILVLDMSFL YHVDPRETCV YITYQGLCKS QHETSRITFD TVWVLFLASQ  180
NPFNELPNVA TTEATNGDVV GGASFKGVRW WRRKLQSSPS TVEGAAHGSS RGGRKLQTKA  240
RSSDPFIDNI GSLAEAALES INGGGKRLGG VSLKRIAWST LEGFRKVDPD QWEFANEGFL  300
RGQKHLLKNI SRRKSTHPHN QQQQPQTQSS IEVGKFGLEE EIERLKRDKN VLMQELVRLR  360
QQQQATDQQL NTLGQRLQGM EQRQQQMMSF LAKAMQSPGF LAQLVQQNDS NRRIVGVSKK  420
RRLPRQENKE DGESAVHDGQ IIKYQPLINE AAKAMLMQIL KFDTSPRLES FGNSQNLLLE  480
NFSSPMEAFD GRSSLKRISG VTLSEVPTSM GFPSLPTNSG YSTMHSSVPS DIQSSSVVAD  540
MVATTEMPSM NTGAGSVAPS HSANGMLKLS EGQSAMPNGL HSFVGPTGGN IPMNREIMDE  600
LAGIDTEKFS FDTDVDILND DEKLPSINDP FWEQFLTASP LLGDSEEVDS GIHETEEMTL  660
ESGDDDWDSS RNMDHLTEQM GHLTSETNRH ACPSELGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	2e-73	HSF family protein