PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW19035.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 468aa    MW: 52096.2 Da    PI: 7.0003
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW19035.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS400.71.5e-122934672373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lLl+cAe  + gdl +aq++ + l  +asp+gd++ Rl++ f++AL+ r+ r  + +++a pp++ +        +++  f++++P+l+f+hltaNq
  RWW19035.1  93 RQLLLSCAELAHRGDLPAAQRTASFLLATASPYGDSTDRLVHQFARALSLRVERLLPPVVDAAPPEALQ--------SSYLSFNQITPFLRFAHLTANQ 183
                 79****************************************************999999988888876........57788***************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl..........vakrle 187
                 aIleav+g ++vHi+Dfd s+GlQWp+Llqa+a+R+  ++pps+RiTg gs    + e l++tg+rL  fA++l+++f+f++l          +++  +
  RWW19035.1 184 AILEAVDGRRQVHILDFDTSHGLQWPPLLQAIAERSdpKDPPSIRITGTGS----NLEVLRRTGDRLLTFADSLNLRFQFHPLlllpatssnpLSSISA 278
                 ***********************************98888***********....99**************************9999986665555566 PP

        GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                 +l+ ++++++pgE+laVn+vl lh+l+++++ ++   + +++L++v+ ++P vv+v+e+ea+hns+ Fl+rf+eal+yy+a+f+slea+lp++s+er+ 
  RWW19035.1 279 NLTSSSFQLHPGETLAVNCVLFLHKLPKDDGGSDGshNLRAFLQAVRAMNPAVVTVAEREASHNSPIFLQRFTEALDYYTAVFESLEATLPPTSRERVA 377
                 7789999********************9998887656899*********************************************************** PP

        GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                 vE+++l++ei++vv+ eg+ rrerhe++e W++ +++aGF+++pls +a +qa+lllr ++ s+gy+++  ++s++lgW+++pL+svS+W
  RWW19035.1 378 VEQVWLSKEIEDVVSREGDGRRERHERFEWWEALMRRAGFTNLPLSPFALSQARLLLRLHYpSEGYQLQMVRDSFFLGWQKKPLFSVSSW 467
                 ****************************************************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    
QSDAKPTNLS LSSTATATAA ALLSSTLHQV LLLYSSRLPL LLLLLLPPPA EEVLDMLSSL  60
KSHEEGDQEH HRHSNPLHPK PQHGQISPSA HARQLLLSCA ELAHRGDLPA AQRTASFLLA  120
TASPYGDSTD RLVHQFARAL SLRVERLLPP VVDAAPPEAL QSSYLSFNQI TPFLRFAHLT  180
ANQAILEAVD GRRQVHILDF DTSHGLQWPP LLQAIAERSD PKDPPSIRIT GTGSNLEVLR  240
RTGDRLLTFA DSLNLRFQFH PLLLLPATSS NPLSSISANL TSSSFQLHPG ETLAVNCVLF  300
LHKLPKDDGG SDGSHNLRAF LQAVRAMNPA VVTVAEREAS HNSPIFLQRF TEALDYYTAV  360
FESLEATLPP TSRERVAVEQ VWLSKEIEDV VSREGDGRRE RHERFEWWEA LMRRAGFTNL  420
PLSPFALSQA RLLLRLHYPS EGYQLQMVRD SFFLGWQKKP LFSVSSWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-113GRAS family protein