PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW19482.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 294aa MW: 32109.7 Da PI: 8.4145

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW19482.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0016	157	180	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C++C+k+F + L H + H RWW19482.1 157 YQCGKCKKVFGSYQALGGHRASrH 180 9*********99998888877666 PP
2	zf-C2H2	10.6	0.0018	206	228	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+Cp C ++F + L H r+H RWW19482.1 206 YECPFCLRVFASGQALGGHKRSH 228 99*****************9999 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MEKHKCSLCF RRFPSGRALG GHMRSPPPKF TGYAVAEEGK LTEQASNGRL RVKGRKRRSR 60 LEEFPESSSA FFAVGSTYVG ESRTDGNHRC RSERAPQAYS RPEPASSASD VTTEEDVALC 120 LMILSRDSWT SGDGEEGDVR PITSRWRPPR RTRSRRYQCG KCKKVFGSYQ ALGGHRASRH 180 RSCTPAVGQR TDGDDDLEAD ADAKVYECPF CLRVFASGQA LGGHKRSHLT SSAAVATMTT 240 TSDHAAKFNR ALGVIDLNLP APVDDDVALS AASDTEFEVT YEFNSSCIPD SGAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	54	61	GRKRRSRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	4e-39	C2H2 family protein