PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW19487.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 366aa MW: 39811.5 Da PI: 7.9222

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW19487.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.4	7e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl RWW19487.1 14 KGLWSPEEDEKLIKHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	48.8	1.6e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++++++ lG++ W++Ia++++ gRt++++k+ w++ RWW19487.1 67 RGTFSQQEEDLIIELHAVLGNR-WSKIAAHLP-GRTDNEIKNLWNS 110 899*****************.*****.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MGGHSCCYKQ KLRKGLWSPE EDEKLIKHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQQEEDLIIE LHAVLGNRWS KIAAHLPGRT DNEIKNLWNS CIKKKLRQRG 120 IDPGTHKPLA EVDGGDDNTQ SNSGKNSEAS DLQILVTPHM AMQEPTPSVS AIEKSVDESA 180 TSKSSATPAR ELFLDQFLAN HESSSSCRSS NSMGYFPFAQ ASFAPDYGGG RTTSSALPIS 240 SNPLLWFSQT SRHLDVTNGD AMSAVVPSLS STILSTSMVP APSCAADDAL PNWYGGDCNS 300 SRRSSVEDSG RIVLQSTCSS DSGIFPWPEL TPDKDVQVQL GGLAGVGGRD GRSKRADEVA 360 APQWKR

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MGGHSCCYKQ KLRKGLWSPE EDEKLIKHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQQEEDLIIE LHAVLGNRWS KIAAHLPGRT DNEIKNLWNS CIKKKLRQRG  120
IDPGTHKPLA EVDGGDDNTQ SNSGKNSEAS DLQILVTPHM AMQEPTPSVS AIEKSVDESA  180
TSKSSATPAR ELFLDQFLAN HESSSSCRSS NSMGYFPFAQ ASFAPDYGGG RTTSSALPIS  240
SNPLLWFSQT SRHLDVTNGD AMSAVVPSLS STILSTSMVP APSCAADDAL PNWYGGDCNS  300
SRRSSVEDSG RIVLQSTCSS DSGIFPWPEL TPDKDVQVQL GGLAGVGGRD GRSKRADEVA  360
APQWKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	8e-88	MYB family protein