PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW19659.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 192aa    MW: 21347.2 Da    PI: 10.2724
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW19659.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF34.23.2e-111848232
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCd 32
                +i+nk  r+++fskRr   + KA+ELS+LC 
  RWW19659.1 18 KIQNKDARYISFSKRRSVFFVKASELSTLCS 48
                699***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MFKATKTTKG KQRIEMRKIQ NKDARYISFS KRRSVFFVKA SELSTLCSFD QVMNRFLSSA  60
ESPGRGRQSQ GGRAPGAVRG QDCKWLDDID ALGSDELDRI DVRTREILMG ANPESVAVDR  120
VGSSPHGGIA TVNPLEPGRP HPNPSIATID FVDISGSFEG IQVRQLVHSP NEVVRRIVYT  180
KTDSNITEKK ER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-09M-type_MADS family protein