PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW19962.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 469aa MW: 51977.6 Da PI: 9.1239

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW19962.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.5	5.5e-06	73	95	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H RWW19962.1 73 YVCEICNQGFQRDQNLQMHRRRH 95 9*********************9 PP
2	zf-C2H2	14.6	9.6e-05	150	172	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C C+k + +s++k H++t+ RWW19962.1 150 WVCARCSKAYAVQSDYKAHLKTC 172 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MLGSPSSAVA APAAAAAAAA GGGTTIPSTT PQPFTSPSNA TSTKRKRRPA GTPDPDAEVV 60 SLSPRTLLES DRYVCEICNQ GFQRDQNLQM HRRRHKVPWK LLRREAAEVR KRVFVCPEPT 120 CLHHDPSHAL GDLVGIKKHF RRKHSSHRQW VCARCSKAYA VQSDYKAHLK TCGTRGHSCD 180 CGRARNVNFY IDCNKLLFSV SLFLCFDGHR VESFIEHQDT CTAGRAPAEI QTRQPTACLS 240 TTASSSSPSS NTNTGPTMWP GLRMPTPAAV FIRRPDQPPS SKPDRYRTQG VELQLLPPSS 300 DPQTTLPSPA MHPVADEVKI TKLHLSIGPA ADHPPSNDPQ RAAARLKDET MEQLKLAMAE 360 KALADDARRQ ARRQHELAEQ EFENAKRIRR QAQLELDRAH AIRERAVQQV DSTTALQITC 420 YACKQQLRAN SAMASEDNSF VVSYMSSVVT EGEEEHDDHK HHRDKISKS

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MLGSPSSAVA APAAAAAAAA GGGTTIPSTT PQPFTSPSNA TSTKRKRRPA GTPDPDAEVV  60
SLSPRTLLES DRYVCEICNQ GFQRDQNLQM HRRRHKVPWK LLRREAAEVR KRVFVCPEPT  120
CLHHDPSHAL GDLVGIKKHF RRKHSSHRQW VCARCSKAYA VQSDYKAHLK TCGTRGHSCD  180
CGRARNVNFY IDCNKLLFSV SLFLCFDGHR VESFIEHQDT CTAGRAPAEI QTRQPTACLS  240
TTASSSSPSS NTNTGPTMWP GLRMPTPAAV FIRRPDQPPS SKPDRYRTQG VELQLLPPSS  300
DPQTTLPSPA MHPVADEVKI TKLHLSIGPA ADHPPSNDPQ RAAARLKDET MEQLKLAMAE  360
KALADDARRQ ARRQHELAEQ EFENAKRIRR QAQLELDRAH AIRERAVQQV DSTTALQITC  420
YACKQQLRAN SAMASEDNSF VVSYMSSVVT EGEEEHDDHK HHRDKISKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	44	49	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-118	C2H2 family protein