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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW20044.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | WRKY | ||||||||
| Protein Properties | Length: 103aa MW: 11631.4 Da PI: 9.4722 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 40.9 | 4.2e-13 | 30 | 69 | 20 | 59 |
S-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 20 fprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+ r+Y++C + C++kk+ve +dp+ v++tY g H+h+
RWW20044.1 30 HHRGYFKCREKLCKAKKRVEWPPSDPSSVKVTYDGVHDHP 69
579************************************8 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 103 aa Download sequence |
MEALGKELNH LLARSVYQKN AWFSMLHVLH HRGYFKCREK LCKAKKRVEW PPSDPSSVKV 60 TYDGVHDHPS PQLLSASYQE APAGMANRYN LVIQVLGLPG DSS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G62340.1 | 5e-11 | WRKY family protein | ||||




