PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW20159.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

RAV

Protein Properties

Length: 356aa MW: 38996.1 Da PI: 9.2716

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW20159.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	43.1	1.1e-13	74	122	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+ykGV + +grW A+I++ r r++lg+fg + eAa+a++ a+++++g RWW20159.1 74 SHYKGVVPQP-NGRWGAQIYE------RhHRVWLGTFGDEAEAARAYDVAAQRFRG 122 79**9888.8*****......44******99**********998 PP
2	B3	86.8	1.8e-27	199	293	1	89
EEEE-..-HHHHTT-EE--HHH.HTT......---.....--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkke...esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+kv tpsdv+k++rlv+pk+ ae+h + +++ l +ed g +W+++++y+++s++yvltkGW+++vk++gLk+gD+v F ++ e RWW20159.1 199 FDKVVTPSDVGKLNRLVIPKHLAEKHfpsksgS---SlacKGVLLNFEDAGGGVWRFRFSYWNSSQSYVLTKGWSRYVKEKGLKAGDVVSFWRSTGPE 293 89**********************9877652...1344889**********************************************8654344 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MISPVSSCGN ESSGDAFAMD SSFVEEALSD SEKRLQAPLH VMVALQRMGS GASVVLDPIL 60 RGGTEAESRK LTSSHYKGVV PQPNGRWGAQ IYERHHRVWL GTFGDEAEAA RAYDVAAQRF 120 RGCDAITNFG PLSDSAYDDA GELSFLAAHS KAEIVDMLRK HTYRDELQQR KRAFGAGRSA 180 TVGRRKTPGY SLSAREFLFD KVVTPSDVGK LNRLVIPKHL AEKHFPSKSG SSLACKGVLL 240 NFEDAGGGVW RFRFSYWNSS QSYVLTKGWS RYVKEKGLKA GDVVSFWRST GPEKPLYIDC 300 RTGAVASNPS LPSVIRLFGV NISELPASDG EGKRGREATE CFPPPKPLEK PFVEAL

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MISPVSSCGN ESSGDAFAMD SSFVEEALSD SEKRLQAPLH VMVALQRMGS GASVVLDPIL  60
RGGTEAESRK LTSSHYKGVV PQPNGRWGAQ IYERHHRVWL GTFGDEAEAA RAYDVAAQRF  120
RGCDAITNFG PLSDSAYDDA GELSFLAAHS KAEIVDMLRK HTYRDELQQR KRAFGAGRSA  180
TVGRRKTPGY SLSAREFLFD KVVTPSDVGK LNRLVIPKHL AEKHFPSKSG SSLACKGVLL  240
NFEDAGGGVW RFRFSYWNSS QSYVLTKGWS RYVKEKGLKA GDVVSFWRST GPEKPLYIDC  300
RTGAVASNPS LPSVIRLFGV NISELPASDG EGKRGREATE CFPPPKPLEK PFVEAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68840.2	1e-110	RAV family protein