PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW20446.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 244aa MW: 28173.6 Da PI: 7.5311

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW20446.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.2	1.7e-35	11	102	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y+i++d+ +++++sw e++++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F+kg k+ll++i+ RWW20446.1 11 FLTKTYQIVDDPGTDHIVSWGEDETTFVVWRPPEFARDLLPSYFKHNNFSSFVRQLNTYGFRKIVADR---------WEFANEFFRKGGKHLLSEIH 98 9**************************************************************999.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k RWW20446.1 99 RRKA 102 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MVSHRPVPAP FLTKTYQIVD DPGTDHIVSW GEDETTFVVW RPPEFARDLL PSYFKHNNFS 60 SFVRQLNTYG FRKIVADRWE FANEFFRKGG KHLLSEIHRR KASIQAPQSY NHLQRQLLNH 120 SPPPHHLQDE ASSWIEPPPT ATGGDADFLS ALSQDNQRLR SRNSLLLSEL THMKKLYNDI 180 IYFLQNHVAS VSTDQSCIDP RGYRLAMDSQ SGSQWHRDEG SIKLFGVPLH DIKKRVHLET 240 DSET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	6e-76	HSF family protein