PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW20522.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 161aa    MW: 17973 Da    PI: 11.5781
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW20522.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF81.94e-261160251
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                r+e+ + rqv fskRr g++KKA+EL vLCdaeva+++fs+ gklye+ss
  RWW20522.1 11 RVEDRISRQVRFSKRRSGLFKKAYELAVLCDAEVALVVFSPAGKLYEFSS 60
                789*********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MARRGRVELR RVEDRISRQV RFSKRRSGLF KKAYELAVLC DAEVALVVFS PAGKLYEFSS  60
ILRCATSPSP PPPSLVHGTM IANTTIPSHP PPLWIISFTI HVETLFIWSL GLRLPPLSFS  120
TKRQGGGTRL PMRKRERDPI VFAGDPSLPP SSLSSVDSHR L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61120.11e-26MIKC_MADS family protein