PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW20524.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 251aa    MW: 28304 Da    PI: 10.8483
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW20524.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.12e-27108157251
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 rie+   rqv fskRr g++KKA+ELSvLCdaeva+++fs+ gklye+ss
  RWW20524.1 108 RIEDRVSRQVCFSKRRSGLFKKAYELSVLCDAEVALLVFSPAGKLYEFSS 157
                 8***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MNPRASESLA SITVFFPWEE RYLLEQFRKS RPRLSAASGC YVGGAPRCLR ERAQRTHGPP  60
YHLFVIGLAL SCACGVQPRR SLLMCGRLAD RVSKRRKMAR RGRVELRRIE DRVSRQVCFS  120
KRRSGLFKKA YELSVLCDAE VALLVFSPAG KLYEFSSVSR YVTSSAYHHN LLLFILRLLI  180
SRSLHRHPPP TIIYFKIHLK TLCVARPSVI SSLALDPTAG SWYGPADAGA GEEFHLVWGR  240
SITSALFSSF S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.15e-26MIKC_MADS family protein