PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW20558.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 227aa    MW: 24755.1 Da    PI: 6.2195
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW20558.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260114.76.1e-3671071100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++Cv+apyf +eq +++fa+vhk+FGasn +kll +lp  +r++a+ ++ yeA+ar++dP+yG+v++i++lqqq++   +e+++l+
  RWW20558.1   7 PCGACKFLRRKCVRGCVFAPYFSHEQaAAHFAAVHKVFGASNASKLLMHLPVADRSEAALTISYEAQARLQDPIYGCVAHIFALQQQVSICCSEVVTLE 105
                 7***********************9978************************************************************99999988887 PP

      DUF260  99 ee 100
                 ++
  RWW20558.1 106 AQ 107
                 76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MAGLGSPCGA CKFLRRKCVR GCVFAPYFSH EQAAAHFAAV HKVFGASNAS KLLMHLPVAD  60
RSEAALTISY EAQARLQDPI YGCVAHIFAL QQQVSICCSE VVTLEAQLAS LKAQTAQGVV  120
SGYSSSIPRL EEDRYSNKLP PYRPGESLPL MPQRLGADTP PNPEPMPCQD HELVDSNSFQ  180
SSQLELVDDN SSCAMATLDL EAYTWRSAHH HDMEDLRSVA FGRLNCA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.16e-47LBD family protein