PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW20578.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 222aa MW: 25400.1 Da PI: 4.5902

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW20578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.6	2.4e-19	36	89	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++++ e++ +LA+ lgL+ rqV vWFqNrRa++k RWW20578.1 36 KKRRLSVEQVKALEKNFEVENKLDPERKLRLAQDLGLQPRQVAVWFQNRRARWK 89 456899***********************************************9 PP
2	HD-ZIP_I/II	127.3	6.4e-41	35	124	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 ekkrrls eqvk+LE++Fe e+kL+perK +la++LglqprqvavWFqnrRAR+ktkqlE+dy aLk+++dal+ + ++L++++e+L ++ RWW20578.1 35 EKKRRLSVEQVKALEKNFEVENKLDPERKLRLAQDLGLQPRQVAVWFQNRRARWKTKQLERDYGALKARHDALNLDCDALRRDNEALLAS 124 69***********************************************************************************99865 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
EEKGKYEALL LDGTEELDGC EEEELCGTGL SGLGEKKRRL SVEQVKALEK NFEVENKLDP 60 ERKLRLAQDL GLQPRQVAVW FQNRRARWKT KQLERDYGAL KARHDALNLD CDALRRDNEA 120 LLASTKAVEE ERRPLIQKDG ASDSDSSVVF NDETSPHAGT VLHQQYLRGF RSHCPFLPLE 180 DKAQAEKHYL DEEFLAGEEL GSSLFSEQQA PNFSWYCSDE WD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	84	92	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G40060.1	4e-52	HD-ZIP family protein