PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW20630.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 265aa MW: 28200.5 Da PI: 6.9889

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW20630.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00076	117	139	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H RWW20630.1 117 YQCKTCDKCFPSFQALGGHRTSH 139 9***********99998888777 PP
2	zf-C2H2	14	0.00015	179	201	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H RWW20630.1 179 HECSICGAEFSSGQALGGHMRRH 201 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MDAVVEDQNN HSVSSDNSHS NGRFATATVK GKRTKRQRAA AVSPASSTSS AELSSSATEE 60 EEDMANCLIL LAQGRSLVAG AESETAVENA SQAEKSTARK LTETATTANG KPGVYVYQCK 120 TCDKCFPSFQ ALGGHRTSHK KPKMAPVDDG DGLRITMNSP IAKPVVASHI ISINKPRVHE 180 CSICGAEFSS GQALGGHMRR HRPTTESSEA KKEKNVLLPL DLNLPAPSDD DSQDLPKLPP 240 PAAAFPFETQ QPLVFSASAL VDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	2e-45	C2H2 family protein