PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW20682.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 561aa    MW: 61267.5 Da    PI: 6.9566
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW20682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS276.77.2e-85874601374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lLl++A av++g +++   +L +l  +as +gdpmqR+ ayf+ +Laar++ + s ly+++ + +t+    +ee+aa++ ++ +sP+++f+h+taN
  RWW20682.1  87 LIHLLLAAAAAVDAGRASASMDALVELYRHASLHGDPMQRVMAYFADGLAARVLPEASPLYQSIMAPPTP----EEEFAAFTDLYRASPYFQFAHFTAN 181
                 689************************************************************9998887....688899999**************** PP

        GRAS 100 qaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrledle 190
                 q+I+ea+e e      r+H+iDfd+s+G+QWp+L+q+L + +    p sl +Tg+g     s+eeleet+ rL  f++ + +++f f+ l    l   +
  RWW20682.1 182 QTIMEAFEAEeqhngGRLHVIDFDVSYGFQWPSLIQSLCDTAttIRPISLHLTGFGG----STEELEETETRLVGFCKGCsNLDFVFRGL----LRGST 272
                 ********9988888899*********************877545566*********....9***************98648*******8....77888 PP

        GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPk.vvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288
                 +++L+++++ +laVnlv+ l++l ++s  l     ++L  ++sl+P+ vvv+ve+e +++ +sFl+r +++l+y++a+f sl+  lp+es er ++E+ 
  RWW20682.1 273 TKDLEIDKDATLAVNLVFYLQTLKSSSEML-----ATLTSIRSLNPRaVVVLVEKEDSRGPASFLARTVDTLNYFAAMFHSLHDCLPAESTERLSIEKN 366
                 99*******************998444443.....47*********8567889********************************************** PP

        GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllr.........kvksdgyrveee.sgslv.lgWkdrpLvsvSaWr 374
                  lgrei+ +  ++  +   ++   + W+ r++++G++ ++ls++  +qaklll+         +v++ g+ + e  +g  + l+W+dr+L++vSaWr
  RWW20682.1 367 HLGREIKAAMGKSSHH---EKVVGGPWKGRMGSVGYRGMKLSSRSLSQAKLLLKirshfssieHVSNSGFGIAEGdDGRTIsLCWQDRNLITVSAWR 460
                 *******998888777...667799***************************982222222112234455555334555556**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 561 aa     Download sequence    
MKLPPNISSS PFVPRDTMEK EAGGGIEEEP LRLGLGVGSA WRSNAVGRGK ARDAEERKLL  60
GLLQAREDTL RVDPMRSGPE DARDQRLIHL LLAAAAAVDA GRASASMDAL VELYRHASLH  120
GDPMQRVMAY FADGLAARVL PEASPLYQSI MAPPTPEEEF AAFTDLYRAS PYFQFAHFTA  180
NQTIMEAFEA EEQHNGGRLH VIDFDVSYGF QWPSLIQSLC DTATTIRPIS LHLTGFGGST  240
EELEETETRL VGFCKGCSNL DFVFRGLLRG STTKDLEIDK DATLAVNLVF YLQTLKSSSE  300
MLATLTSIRS LNPRAVVVLV EKEDSRGPAS FLARTVDTLN YFAAMFHSLH DCLPAESTER  360
LSIEKNHLGR EIKAAMGKSS HHEKVVGGPW KGRMGSVGYR GMKLSSRSLS QAKLLLKIRS  420
HFSSIEHVSN SGFGIAEGDD GRTISLCWQD RNLITVSAWR CSSRVVTPHP HPHSTPIQLP  480
DSSCPITSPT HAASKMTRAT LLNGSSISPR SAHDKALSSF PADMQPSQEL LPGMFHTAVG  540
EKSGFGVFFA NARIAKCSEN L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04890.13e-37GRAS family protein