PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW20713.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family YABBY
Protein Properties Length: 151aa    MW: 16820.1 Da    PI: 9.9121
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW20713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY163.91.2e-50112431170
       YABBY  31 lfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekrqrvPsay 129
                 +f+vvtvrCGhC++llsvn+    q+ + ++         ++++ ++ +++l+   +++++ s+  s+   ++++++ +     + rPPekrqrvPsay
  RWW20713.1   1 MFNVVTVRCGHCANLLSVNMGALLQAFPLQDF--------QVHNFGSPSNKLEIGSSSRRNRSSLYSM---TDEQQQ-IV----ALRPPEKRQRVPSAY 83 
                 69**************************9996........5667777777666665555555554444...445544.44....48************* PP

       YABBY 130 nrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                 nrfi+eeiqrika+nPdish+eafsaaaknWahfP+ihfgl
  RWW20713.1  84 NRFIREEIQRIKANNPDISHKEAFSAAAKNWAHFPHIHFGL 124
                 ***************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MFNVVTVRCG HCANLLSVNM GALLQAFPLQ DFQVHNFGSP SNKLEIGSSS RRNRSSLYSM  60
TDEQQQIVAL RPPEKRQRVP SAYNRFIREE IQRIKANNPD ISHKEAFSAA AKNWAHFPHI  120
HFGLTLDGSK QVKLDDAIAA APGGEKAPGF Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.11e-54YABBY family protein