PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW20865.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 919aa MW: 100683 Da PI: 6.0968

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW20865.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00043	762	783	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++Cg +F+ +++L+ H+ H RWW20865.1 762 QCHKCGLRFRLQEQLQCHLDWH 783 8*****************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 919 aa Download sequence
MQVTSEQKLP SLYLLDSIVK NLGRDYIRYF AARLPEVDSA IYIFFANLSY ILQNMQHSQR 60 VTVNNVINEK KGRKDARDHE YSSDFSREAD LGILRVSDRL KDQDGHGKPY YGVGITATQA 120 QFSERNGFDV NHSYGTYGKS GPMRANSQQT SVCDTDRTKL ESSRSWKNSE EEEYMWDDIK 180 TRPTDYGGTN NSIKGGWTSG NADKSACLQR GKWIPPETEH AKTNLTTVDA FSHSVETSKT 240 ESRVPLFKAN DIHIMQDLGE QILPSRAKLD TDSVLQTSSN PLLQQRASSE NASSFWSRHD 300 VPASEVGINY KSSRVGQQLI PSGGGLSTHD NSSLPLPGLQ SSVLSSRLSP HANIPVPSAT 360 YEQQRQHLSQ PPRSLSSHLP PPPEPIQHLK PRNLTDQDQL LFNSFSHMGR KPLQLVGSLD 420 IFPVKNHAQP FDSLSGSIES QSETSQQLEG SLDSATSASL NHLRDHLPLI KQSRHNLSQQ 480 QAETQPLSRT EAQTQPSLKI KTQSRPSHQT EKLPPLPMDL GIHQTGKDSG TSHANNPVVE 540 ASSQPSTSSL LAAIMNSGLF SNNSVNNIQK MSVQPPLPVG PPPVQVSTSA APLSTPLTFT 600 PPFSLGNTPD LKPPHSGDVI PPLPLGPPPS SSLVDVNSEN SKTSGPTPSP FSGLLSSLVA 660 KGLIASQPTV LITTSVAQLP DKVQDQCSST SLEQVSLSST TPGVPPPLED QPDASVSTAA 720 AALVQCDATA LEDHIGTEFK SEIVRGSHPA VVRSLFDDLK LQCHKCGLRF RLQEQLQCHL 780 DWHVSEESET SNFNQRSRKW FSEMRYQQSS SEVAISLEEV GSSEKNSELM VPADEGQSIC 840 ALCGEPFEDI YSEARDEWMY KGTVYLDLSK KQNDASNTNG TSGQLPIVHA HCMSQRFCHN 900 MDVAEHDKED QTNVPIGLF

Sequence ? help Back to Top

Protein Sequence Length: 919 aa Download sequence

MQVTSEQKLP SLYLLDSIVK NLGRDYIRYF AARLPEVDSA IYIFFANLSY ILQNMQHSQR  60
VTVNNVINEK KGRKDARDHE YSSDFSREAD LGILRVSDRL KDQDGHGKPY YGVGITATQA  120
QFSERNGFDV NHSYGTYGKS GPMRANSQQT SVCDTDRTKL ESSRSWKNSE EEEYMWDDIK  180
TRPTDYGGTN NSIKGGWTSG NADKSACLQR GKWIPPETEH AKTNLTTVDA FSHSVETSKT  240
ESRVPLFKAN DIHIMQDLGE QILPSRAKLD TDSVLQTSSN PLLQQRASSE NASSFWSRHD  300
VPASEVGINY KSSRVGQQLI PSGGGLSTHD NSSLPLPGLQ SSVLSSRLSP HANIPVPSAT  360
YEQQRQHLSQ PPRSLSSHLP PPPEPIQHLK PRNLTDQDQL LFNSFSHMGR KPLQLVGSLD  420
IFPVKNHAQP FDSLSGSIES QSETSQQLEG SLDSATSASL NHLRDHLPLI KQSRHNLSQQ  480
QAETQPLSRT EAQTQPSLKI KTQSRPSHQT EKLPPLPMDL GIHQTGKDSG TSHANNPVVE  540
ASSQPSTSSL LAAIMNSGLF SNNSVNNIQK MSVQPPLPVG PPPVQVSTSA APLSTPLTFT  600
PPFSLGNTPD LKPPHSGDVI PPLPLGPPPS SSLVDVNSEN SKTSGPTPSP FSGLLSSLVA  660
KGLIASQPTV LITTSVAQLP DKVQDQCSST SLEQVSLSST TPGVPPPLED QPDASVSTAA  720
AALVQCDATA LEDHIGTEFK SEIVRGSHPA VVRSLFDDLK LQCHKCGLRF RLQEQLQCHL  780
DWHVSEESET SNFNQRSRKW FSEMRYQQSS SEVAISLEEV GSSEKNSELM VPADEGQSIC  840
ALCGEPFEDI YSEARDEWMY KGTVYLDLSK KQNDASNTNG TSGQLPIVHA HCMSQRFCHN  900
MDVAEHDKED QTNVPIGLF