PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW20866.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 246aa    MW: 27387.1 Da    PI: 9.7741
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW20866.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.21.6e-09165188225
                 -S---SGGGGTS--TTTTT-SS-S CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaH 25 
                 ++++C+f+++ G C++GdrC++ H
  RWW20866.1 165 DRVNCPFYFKIGACRHGDRCSRLH 188
                 6899******************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
NHHRIINGSI RFRLFSLPWG PYTDPDAPGG LWLAGGQQKR QGIVPPSFGS GKKNTAPMTT  60
GFAGDEVKAS EQFEARGDQR GSPASQKPQI KTRGGEEEGK ARAWIGAAIT RGVEEGESTF  120
RRVRVTPLVV YKARVASLPL LLFSEWSSLE AMAEHLASIF GTEKDRVNCP FYFKIGACRH  180
GDRCSRLHTK PSISPTLLLS NMYQRLDNAI TPGLDSQGQP MDPRQIQEHF EVLNSIFFFF  240
FFLRCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44785.13e-32C3H family protein