PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW21020.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 279aa MW: 31363.2 Da PI: 8.6086

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW21020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.9	1.8e-16	41	88	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde l+ v++ G g+W+t +++ g+ R++k+c++rw +yl RWW21020.1 41 RGPWTAEEDEVLASFVRREGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 88 89****************************99**********97 PP
2	Myb_DNA-binding	51	3.4e-16	95	139	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+ T++E++++++++++lG++ W++Ia +++ gRt++++k++w+++l RWW21020.1 95 GPITPDEEDIILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 139 678****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MRNPLGSLVA EEGQQQQQQQ QRRRRGVSTP TPCCSKVGMK RGPWTAEEDE VLASFVRREG 60 EGRWRTLPKR AGLLRCGKSC RLRWMNYLRP SIKHGPITPD EEDIILRLHR LLGNRWSLIA 120 GRIPGRTDNE IKNYWNTHLS RKLIKQGIDP RTHKPFTFST NPNPTLPSTP PPRHPTANPD 180 PTPSAPPAPV ATGGGYFNVG CQNSEEGRKG ADGCTVDFFS DLFDPFIHDD ILMQQHHSAV 240 NNHTDNSNSN NEMLDPMGAS LVPSFGFEGL WEDPFTYFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	4e-78	MYB family protein