PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW21039.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 252aa MW: 29182.1 Da PI: 9.5278

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW21039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv +++ +G g+W++ ++ g+ R++k+c++rw +yl RWW21039.1 14 KGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	55.5	1.3e-17	67	137	1	47
TSSS-HHHHHHHHHHHHHTTTT.........................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.........................tWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel+++++ +lG++ +W++Ia++++ gRt++++k++w+++ RWW21039.1 67 RGNFTEEEDELIIKLHSLLGNKyvspslsasresrrpwrdhvrlddrRWSLIAARLP-GRTDNEIKNYWNTH 137 89*****************************************************.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MGRSPCCEKA HNNKGAWTKE EDDRLVAYIR AHGEGCWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEEDELIIK LHSLLGNKYV SPSLSASRES RRPWRDHVRL DDRRWSLIAA 120 RLPGRTDNEI KNYWNTHIRR KLLCRGVDPV THRPVNRHGS DTTTPSRRKP VVVGFGPDQE 180 EEKSSSVEWS PDLNLELRIS PPFQPEEPPV PAKREGEQLR GLCLGLQKSQ TECHWREFLG 240 LSTDAMLDYR RQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	1e-85	MYB family protein