PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW21207.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 146aa    MW: 16207.6 Da    PI: 8.8757
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW21207.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.12.6e-29959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+i+n + rqvtfskRr g++KKAeELS+LCdaeva+i+fsstgkl+e+ss
  RWW21207.1  9 KKISNATARQVTFSKRRRGLFKKAEELSILCDAEVALIVFSSTGKLFEFSS 59
                68***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MAREKIQIKK ISNATARQVT FSKRRRGLFK KAEELSILCD AEVALIVFSS TGKLFEFSSS  60
SSCFAQTAYG KQVVMMAREE KQLVTESENI TYEDGQSSES VSNALHLRMP QDTDDNSHTT  120
LQLGVKVGVT VRVPWTKSCI IIVVGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.15e-36MIKC_MADS family protein