PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW21214.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 243aa    MW: 26792.8 Da    PI: 4.8114
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW21214.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF43.15.6e-1417481243
                HHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
      SRF-TF 12 tfskRrngilKKAeELSvLCdaevaviifsst 43
                ++ kRr+gi KKA+ELS+LC+a+v+++ + ++
  RWW21214.1 17 SLDKRRQGICKKASELSTLCNADVCLVCYPPD 48
                688************************99765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MAPSDEQRRS QKSILRSLDK RRQGICKKAS ELSTLCNADV CLVCYPPDAA APVVWPEDPT  60
RVGRTIRRYL AASSSKKLAK NQVSFKNPNP SQAQEAVTNN GDDDDDDEDD DDDDEEEEEY  120
KEAKARKGKE KVVDTEDRLR LPWPDDERAL GSLVEALDSR LKKVRARIEQ LVAEDVASTS  180
TAPAPPDKYS TATGGASTSG SACREPPVPA FATVCPCLYC PLHGCWGVEC LHCQGRRPRE  240
DRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18650.13e-10M-type_MADS family protein