PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW21269.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 451aa MW: 48807.4 Da PI: 8.366

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW21269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.2e-05	1	23	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H RWW21269.1 1 FICEVCNKGFQREQNLQLHRRGH 23 89*******************88 PP
2	zf-C2H2	12.9	0.00033	77	99	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ RWW21269.1 77 WKCDKCSKRYAVQSDWKAHSKTC 99 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKNPKDVRRR VYTCPEPACV HHDPSRALGD 60 LTGIKKHYCR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TREYRCDCGT LFSRRDSFIT 120 HRAFCDALAQ EGARIPAAMS IGSHLYGDNG INLDLPPVDS QLSSMQNQIR LGGGATQFDH 180 LTMPSFRPPP SASSFYLGGG SGHQDFNDST HGLLQLQDLQ VHASSPSAAA GFDIFDLGIF 240 SNSSNRNAMA SSSSAGMNPN AHLLIPAQLG NASGSDEPTT LFAGNLMSNH LDPNMSSLYN 300 HPMSKESIAP HMSATALLQK AAQMGATSSR ATASSLLRGL GRSFDGVRES SASPEEDETQ 360 FQGLVSSLAT GNNTGSFGGG NESKLQEYPS ASGRGASDRL TRDFLGVGGM MRNMGRGIAR 420 REQHSGMDMD ELDSEMKSGS STPSFVGGNL Q

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKNPKDVRRR VYTCPEPACV HHDPSRALGD  60
LTGIKKHYCR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TREYRCDCGT LFSRRDSFIT  120
HRAFCDALAQ EGARIPAAMS IGSHLYGDNG INLDLPPVDS QLSSMQNQIR LGGGATQFDH  180
LTMPSFRPPP SASSFYLGGG SGHQDFNDST HGLLQLQDLQ VHASSPSAAA GFDIFDLGIF  240
SNSSNRNAMA SSSSAGMNPN AHLLIPAQLG NASGSDEPTT LFAGNLMSNH LDPNMSSLYN  300
HPMSKESIAP HMSATALLQK AAQMGATSSR ATASSLLRGL GRSFDGVRES SASPEEDETQ  360
FQGLVSSLAT GNNTGSFGGG NESKLQEYPS ASGRGASDRL TRDFLGVGGM MRNMGRGIAR  420
REQHSGMDMD ELDSEMKSGS STPSFVGGNL Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	3e-93	C2H2 family protein