PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW21701.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 350aa MW: 37453.5 Da PI: 8.606

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW21701.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.0005	179	201	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F++ L H+ +H RWW21701.1 179 HICSECGKGFRSFQALGGHMTRH 201 68******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MAVDAVDAAA NRDETPPPSS SHLAESHEKN NGSERHDSSA SPSSVTPEKD ADGSRFHDFT 60 KDELYAAFCL VMLSRGFFGG RGDFERDDVL PTLEQPLQSH DPAPEHQTQR SPPKKPQTQR 120 SPPKKPQTLS LGERRTQRSP LKEPLTLTLA PKGKQTVQKP PPEEQQTQAK TSPSNVESHI 180 CSECGKGFRS FQALGGHMTR HRKPASATLK REKAGEDAAF SVSTNGAASA SSAGDGKTHE 240 CKLCYKSFST GQALGGHMRC HYDGAVGDGR STASNGVTIA ALSSSAPAGS GNNRWFDLNQ 300 LPSPPQFPKR KEAEEEATSH LASVPKKPRL STAGIGPPPP PPPPSLHSFF

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MAVDAVDAAA NRDETPPPSS SHLAESHEKN NGSERHDSSA SPSSVTPEKD ADGSRFHDFT  60
KDELYAAFCL VMLSRGFFGG RGDFERDDVL PTLEQPLQSH DPAPEHQTQR SPPKKPQTQR  120
SPPKKPQTLS LGERRTQRSP LKEPLTLTLA PKGKQTVQKP PPEEQQTQAK TSPSNVESHI  180
CSECGKGFRS FQALGGHMTR HRKPASATLK REKAGEDAAF SVSTNGAASA SSAGDGKTHE  240
CKLCYKSFST GQALGGHMRC HYDGAVGDGR STASNGVTIA ALSSSAPAGS GNNRWFDLNQ  300
LPSPPQFPKR KEAEEEATSH LASVPKKPRL STAGIGPPPP PPPPSLHSFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49930.1	1e-22	C2H2 family protein