PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW21878.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 279aa MW: 30853.6 Da PI: 6.3991

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW21878.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.7	1.7e-15	22	69	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ + G g+W+ +ar g+ R++k+c++rw +yl RWW21878.1 22 KGLWSPEEDEKLMNYMLRNGQGCWSDVARNAGLQRCGKSCRLRWINYL 69 678*******************************************97 PP
2	Myb_DNA-binding	51.2	2.8e-16	76	118	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+++++E+el+v+++ lG++ W+ Ia++++ gRt++++k++w++ RWW21878.1 76 GAFSPQEEELIVHLHSILGNR-WSQIASRLP-GRTDNEIKNFWNS 118 79*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MMRKNELTGD NTNVDGNSKL RKGLWSPEED EKLMNYMLRN GQGCWSDVAR NAGLQRCGKS 60 CRLRWINYLR PDLKHGAFSP QEEELIVHLH SILGNRWSQI ASRLPGRTDN EIKNFWNSTI 120 KKRLKNSTNT GDPNSKAAIG SLAGAKEHQR QSVYTHSSPP SSSSSSSMHG FSVGNQYDLL 180 PLPGAAGCGV ARVEDSYFHE PQALAQVGME MAMVEGGLMG AGCELFVPPL ESSQEENAMN 240 VDVSDGGGVF WEGENMRVAR WELGDLMKDA SFPFPWFPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12870.1	9e-69	MYB family protein