PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW21970.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MIKC_MADS
Protein Properties Length: 145aa    MW: 16273.7 Da    PI: 9.726
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW21970.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF76.42.2e-24958150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                krien ++rq tf kRr g++KKA ELSvLCda+ ++++fss+gkly y 
  RWW21970.1  9 KRIENPIQRQSTFYKRRDGLFKKARELSVLCDADLLLLLFSSSGKLYQYH 58
                79**********************************************96 PP
2K-box13.72.7e-06641044888
       K-box  48 lkeLqqLeqqLekslkkiRskKnellleqieelqkkekelq 88 
                 l +L  Le++Le+++ k+R   ++ + +qi++l  +  ++q
  RWW21970.1  64 LPDLGLLEHNLETAIGKVRVEMDRKIGAQIHKLETMIARVQ 104
                 679999*************************9988776666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MGRGRTEIKR IENPIQRQST FYKRRDGLFK KARELSVLCD ADLLLLLFSS SGKLYQYHSP  60
SYTLPDLGLL EHNLETAIGK VRVEMDRKIG AQIHKLETMI ARVQTLRGME ADGSASSTPG  120
LDLRLGTYSS VDTLLGSSPW FSAHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15800.11e-10MIKC_MADS family protein