PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW22017.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 277aa MW: 30525.3 Da PI: 7.0002

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW22017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.1	2.7e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+ +++++G+g +W + +++ g++R++k+c++rw++yl RWW22017.1 14 RGPWSPEEDATLKIYIEKHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	46.2	1e-14	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g++T++Ed ++ + ++lG++ W+ Ia+ m+ gRt++++k++w++ RWW22017.1 69 GAFTEDEDTIICTLYNRLGSR-WSIIASQMP-GRTDNDVKNYWNT 111 89*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MGRAPCCDKA NVKRGPWSPE EDATLKIYIE KHGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPDIKHGA FTEDEDTIIC TLYNRLGSRW SIIASQMPGR TDNDVKNYWN TKLKKKLMLR 120 HANLSVTNHI LHSPPPTSAP PILPTVKTEV FGSTDFDFPT VPLHPDYGIT TEQPQKLYSD 180 VMPYAHANGQ VVSPSEEVSA ASSSITVETS SSHSFLNWST AGVGSNDLFL SALGFGGAGD 240 FLGGYEYQEN LYFPNPSIMW AASETDAQGL HQSPTYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	7e-73	MYB family protein