PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW22230.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 464aa MW: 50107.9 Da PI: 6.8835

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW22230.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	12	34	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C ksF++ +L H+rtH RWW22230.1 12 HRCKVCRKSFPTGRSLGGHMRTH 34 79********************9 PP
2	zf-C2H2	10.7	0.0017	316	338	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F ++ L H +H RWW22230.1 316 FECKSCNKVFDSHQALGGHRASH 338 89*************99999888 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MEGDRLLASS KHRCKVCRKS FPTGRSLGGH MRTHFTVAAN SSSEGDERQQ SSYSLRENPK 60 KTWRLSDSGD GDGEMQCAEC GNEFLSWRAF FGHMRCHSEK PSEERREHGG LCGNVVHRNG 120 FGSQLGSEAA AETVAGRRIR SKRTYQASPE DEDGAISLML LSRGVRNWSS SCRETSDKNS 180 AEVLETWDFV SNGSEKTGSE SGDPRNGFKK MESRGANDGI VRDDIDETKK PVAYYASSDD 240 DLKNPDQEPT PCPSKNEDPS SVAGELSTKT ALDGTDHELG RNSSSVVERF DPADDSLGHA 300 SSNDCSGKAN KKRSQFECKS CNKVFDSHQA LGGHRASHKR MKGCPGHRTH VAENSTETDA 360 SSVDEAATEN TGSGSSKANK GHQCLICSRF FSSGQALGGH KRSHLVATSG SGGDAAFPIA 420 IPQQPLEKPG VLDLNLPADG SEDLKSWWLG GNLKHKPLLG VISN

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MEGDRLLASS KHRCKVCRKS FPTGRSLGGH MRTHFTVAAN SSSEGDERQQ SSYSLRENPK  60
KTWRLSDSGD GDGEMQCAEC GNEFLSWRAF FGHMRCHSEK PSEERREHGG LCGNVVHRNG  120
FGSQLGSEAA AETVAGRRIR SKRTYQASPE DEDGAISLML LSRGVRNWSS SCRETSDKNS  180
AEVLETWDFV SNGSEKTGSE SGDPRNGFKK MESRGANDGI VRDDIDETKK PVAYYASSDD  240
DLKNPDQEPT PCPSKNEDPS SVAGELSTKT ALDGTDHELG RNSSSVVERF DPADDSLGHA  300
SSNDCSGKAN KKRSQFECKS CNKVFDSHQA LGGHRASHKR MKGCPGHRTH VAENSTETDA  360
SSVDEAATEN TGSGSSKANK GHQCLICSRF FSSGQALGGH KRSHLVATSG SGGDAAFPIA  420
IPQQPLEKPG VLDLNLPADG SEDLKSWWLG GNLKHKPLLG VISN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	7e-24	C2H2 family protein