PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW22289.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NF-YC

Protein Properties

Length: 266aa MW: 29250.2 Da PI: 6.9589

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW22289.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	172.8	3.8e-54	82	186	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q i+++tdfknh+lPlarik+i+kad dv+mis+e+Pv+++kace+fil+ltlrsw+h+eenkrrtl+k+diaaavtrtdifdflvdiv RWW22289.1 82 QLQAFWSNQmleIGQTTDFKNHSLPLARIKRIMKADGDVRMISSEVPVVFAKACEIFILDLTLRSWIHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180 89*****88889********************************************************************************* PP NF-YC 97 prdelk 102 prdelk RWW22289.1 181 PRDELK 186 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MEQSTQPSPR VIGVVSGAAQ TAYAAPTYQP AAVVSGTPAV TGAVPPATQM NSAYPTNPAN 60 LASQHQLAYQ QVQQLHHQQH QQLQAFWSNQ MLEIGQTTDF KNHSLPLARI KRIMKADGDV 120 RMISSEVPVV FAKACEIFIL DLTLRSWIHT EENKRRTLQK NDIAAAVTRT DIFDFLVDIV 180 PRDELKDDGV GIARAAFPAD SVPYYYVPAP PQVPGPAMMM GKPVDQAAAA TLYAFQQPHS 240 VAYMWQQPPA QQQPAQHQQQ VPDGRC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	161	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	1e-64	NF-YC family protein