PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW22536.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 196aa MW: 22230.4 Da PI: 9.6084

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW22536.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53	7.9e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l+ +++ +G g+W++ ++ g+ R++k+c++rw +yl RWW22536.1 14 KGVWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61 799***************************99**********97 PP
2	Myb_DNA-binding	57.3	3.6e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eE el+++++ +lG++ W++Ia +++ gRt++++k++w+++ RWW22536.1 67 RGNFTEEENELIIKLHSLLGNK-WSLIAGKLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MGRSPCCERA HTNKGVWTKE EDDRLIAYIR AHGEGCWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEENELIIK LHSLLGNKWS LIAGKLPGRT DNEIKNYWNT HIRKKLLSMG 120 VDPATHRPIH DRAATKTAVS VGGTEEKAAG FGREQERSGE EETSARRQHH RPPKCPDLNL 180 ELCISPPFQQ APLHPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34990.1	8e-92	MYB family protein