PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW22544.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 249aa MW: 25790 Da PI: 8.1254

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW22544.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	142.3	1.6e-44	25	124	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC++dCv+apyfp +qp+kf vh++FGasnv+kll++l++ +reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+ +l+++k+ RWW22544.1 25 PCAACKFLRRKCQPDCVFAPYFPPDQPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVGVISILQHQLRQLQMDLSYAKS 123 7**********************************************************************************************9998 PP DUF260 100 e 100 e RWW22544.1 124 E 124 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MASSSAQLPL SSSSASSSPS ATSSPCAACK FLRRKCQPDC VFAPYFPPDQ PQKFVHVHRV 60 FGASNVTKLL NELHPYQRED AVNSLAYEAD MRLRDPVYGC VGVISILQHQ LRQLQMDLSY 120 AKSELSKYQS AAAAAAAAAA AGTSTAGLGA TTQAAAAATG HGYIIPGFGL GRDQCFPAAA 180 RDPSHSQQMM MRNYDADLAA RLGANGAYDA GLAAAAMNAT TAATIGLFGG QFPRPSAAGG 240 DERSGIGPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	4e-57	LBD family protein