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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW23015.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | bHLH | ||||||||
| Protein Properties | Length: 152aa MW: 16995.8 Da PI: 9.8863 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 15.6 | 2.9e-05 | 2 | 41 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
RRd++N++f L ++ + + +K +K +iL A++ +++L
RWW23015.1 2 RRDKLNDRFTDLCSVTDPG---KPPKTDKFAILSDATRLLNQL 41
**************99888...89**************99998 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 152 aa Download sequence |
MRRDKLNDRF TDLCSVTDPG KPPKTDKFAI LSDATRLLNQ LRLEAKKFKQ SNEALQEAIK 60 NLKAEKLELR DEKLRLKAEK EQIEQMLKAT RTAPQFITQP TAQNHPISKL PACGHVAMDT 120 SGSFGYFSGS CTKATCCLVI FSVILASKLL VI |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G51070.1 | 1e-22 | bHLH family protein | ||||




