PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW23132.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 331aa MW: 36949.5 Da PI: 7.1719

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW23132.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.6	2.5e-16	28	116	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 +Wt+ v++L+e++++++ +r+klk+ +Wee++ ++ + + ++p+qCk+k+e ++kry+ + + s s ++++ +++a RWW23132.1 28 EWTEGGVRCLLEVYESKWALRNRAKLKGSDWEEIAHHVtvrcSGPKAFKTPTQCKNKIEAMKKRYRSESAAHDHP--SSGSPWQFYARMDA 116 5**********************************999554444567***************9999974..55556*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MDGAHPPTCR DLAPAPALKS PDKGKRDEWT EGGVRCLLEV YESKWALRNR AKLKGSDWEE 60 IAHHVTVRCS GPKAFKTPTQ CKNKIEAMKK RYRSESAAHD HPSSGSPWQF YARMDALLKG 120 TGNCAAHPKP NHDADLPPLP KAEMEVEADG HLHDSNHDDG SNTVPMDINV NGDNNNETKM 180 ENRGTDSHLS APRSKEAASE DGARDPDSSS KRRRILGSEV AESIRLLAQS MLQVERARLE 240 MYKDSERMRA EAEIKRGEME LKRTEIIAKT QLQIAKLFIE GMRRSSKSSN PSSRTELDML 300 PEMDGEVSHM LCSSYVLTTN SIHSFLLASV Y

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	211	215	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	3e-63	Trihelix family protein