PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW23193.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 398aa    MW: 42415.9 Da    PI: 8.4965
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW23193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.54.9e-08258278526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                 +C +far G+Ck G  C+F H+
  RWW23193.1 258 PCLYFAR-GYCKDGTACRFLHD 278
                 8******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MDVYEATRVV LARIQSLDAV NAAKIMGYIL IQEHGDKEMI RLAFGPEALL HSVVLKARKE  60
LGLAASAPPP HSSSSVTPPA AGGVASPSPF GLLARQNSSS CFSTNLVSSP TSFAPPPVFS  120
RAGRANGALN GSLEELQVSE ELLSPGSPSP SPFFNGCATA GDSLVDEFHL QDQLSFLHDQ  180
APRHSLPIGP RSVAAGGGGD LFNPDIGSHS PSGSGDGLLF PYRMGWGVNG NHHRRSWSAA  240
DLPLRSDATA AAGFCWKPCL YFARGYCKDG TACRFLHDLP DETVAAVAAG ARMDAAVEQQ  300
CHELLLRSKS QRFGGGGASQ LTASAFPYSP LGSVPSSPSS TSKCLDFLLQ QQPSDSPRQQ  360
FLSLTPLHLS SAFCLSTVEA KKLWFFTGRQ RRRRRQRR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1388396GRQRRRRRQ
2389398RQRRRRRQRR
3391398RRRRRQRR