PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW23213.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 236aa MW: 26995 Da PI: 6.7789

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW23213.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.7	2.3e-19	47	98	5	56
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++f++ q++ Le++Fe + ++ a+++++LA+++gL+ rqV +WFqN+Ra+++ RWW23213.1 47 RRFSEGQIRSLESAFEAQTKLEARQKQQLAREIGLQPRQVAIWFQNKRARWR 98 48*************************************************9 PP
2	HD-ZIP_I/II	105.5	4e-34	45	133	2	90
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 k rr+s+ q+++LE+ Fe+++kLe ++K++lare+glqprqva+WFqn+RAR+++kql+ +y+aL++ y al ++ ++L+ke++ L ++ RWW23213.1 45 KTRRFSEGQIRSLESAFEAQTKLEARQKQQLAREIGLQPRQVAIWFQNKRARWRSKQLDGEYRALRADYHALLSHFDSLNKEKQLLLKQ 133 88*********************************************************************************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
FVSTLSTKLS LGRRIWRTER EREMGERCGG EEEGECCSKS SKGDKTRRFS EGQIRSLESA 60 FEAQTKLEAR QKQQLAREIG LQPRQVAIWF QNKRARWRSK QLDGEYRALR ADYHALLSHF 120 DSLNKEKQLL LKQRQALADL LDKSEKNDRD AASKEERSRP SVKEEPDLEF AGCTEEEDDK 180 TLSYFCEDEP GPRAVQPATA SLPSSAEKQL HSATGRAAAQ TPSSNSPWWE FWPLSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.2	1e-34	HD-ZIP family protein