PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW23524.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 517aa MW: 56958.9 Da PI: 4.8722

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW23524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	18.4	3.6e-06	1	28	18	45
HHHHSSS--HHHHHHHHHHCTS-HHHHH CS Homeobox 18 lFeknrypsaeereeLAkklgLterqVk 45 +F+++ +p++++r +L+++lgL+ rqVk RWW23524.1 1 MFKECLHPDEKQRMKLSQELGLKPRQVK 28 699************************9 PP
2	START	39.3	1.7e-13	256	327	92	163
EEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEE CS START 92 qlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghsk 163 q+m aelq+lsplvp R+ f Ry++q ++g+w+ vd vd q+ + ++ ++ +Sg++i++++ng+s RWW23524.1 256 QQMHAELQFLSPLVPaREAHFFRYCQQNSEGTWIMVDFPVDGFQEGI-QIPFPWYRRKTSGCVIQDMPNGYSS 327 899****************************************98.677777779************64 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MFKECLHPDE KQRMKLSQEL GLKPRQVKLL AQQDRADNVV LRAENESLKN DNFRLHAAIR 60 NVVCPSCGGP AILNEMSFDE QQLRMENARL KDELERLSYI ASRYSGRQLQ PLGPAPPVLI 120 PSLDLDVGIY SRHFNEPPVV SCTDLIPIPQ ISDEPSPFPG MLIMDQDMPL VVDLAMTAAD 180 HLVRMCNTTE PLWVRRGGTT TVEVLDLEEH ARMCPWPMDL KQQQGMFRTE TSRDSAMVIM 240 NSITMVDAFL DAVSHQQMHA ELQFLSPLVP AREAHFFRYC QQNSEGTWIM VDFPVDGFQE 300 GIQIPFPWYR RKTSGCVIQD MPNGYSSYLF SGGEKEHDEA VTENDNNVLH QRLCLRNALL 360 TDEQRRTQIF LRACVIPLAQ AASNSSHSVD LLLQESSTHP SGGSIVVYAP IDVDAVQVAM 420 SSEDPSYIPL LPTGFVISPA ARQSTAGTSS GGDGHATVGC LLTVGMQVLA TAVPSAKLNL 480 SSVTAIDNHL CNTIQQVRAV LAGGTATAEP AAVAPDQ

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MFKECLHPDE KQRMKLSQEL GLKPRQVKLL AQQDRADNVV LRAENESLKN DNFRLHAAIR  60
NVVCPSCGGP AILNEMSFDE QQLRMENARL KDELERLSYI ASRYSGRQLQ PLGPAPPVLI  120
PSLDLDVGIY SRHFNEPPVV SCTDLIPIPQ ISDEPSPFPG MLIMDQDMPL VVDLAMTAAD  180
HLVRMCNTTE PLWVRRGGTT TVEVLDLEEH ARMCPWPMDL KQQQGMFRTE TSRDSAMVIM  240
NSITMVDAFL DAVSHQQMHA ELQFLSPLVP AREAHFFRYC QQNSEGTWIM VDFPVDGFQE  300
GIQIPFPWYR RKTSGCVIQD MPNGYSSYLF SGGEKEHDEA VTENDNNVLH QRLCLRNALL  360
TDEQRRTQIF LRACVIPLAQ AASNSSHSVD LLLQESSTHP SGGSIVVYAP IDVDAVQVAM  420
SSEDPSYIPL LPTGFVISPA ARQSTAGTSS GGDGHATVGC LLTVGMQVLA TAVPSAKLNL  480
SSVTAIDNHL CNTIQQVRAV LAGGTATAEP AAVAPDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46880.1	1e-92	HD-ZIP family protein