PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW23526.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HB-other

Protein Properties

Length: 641aa MW: 69880.1 Da PI: 7.5695

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW23526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.4e-09	2	26	32	56
HHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 32 eLAkklgLterqVkvWFqNrRakek 56 +L+++lgL+ rq+k+WFqNrR++ k RWW23526.1 2 KLSQELGLKPRQIKFWFQNRRTQVK 26 79*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
MKLSQELGLK PRQIKFWFQN RRTQVKVRLQ SCSSTNNVTR IRSYSFVEES LLIRNCGTLQ 60 AQQDRADNVV LRAENESLKN DNFRLQAAIR NVVCPSCGGP AILSEMSFDE QQLRMENARL 120 KDEVLNPNPS SSQNDLERLP CVASRYSGRQ LQPLGPAPPV LLPSLDLDMG IYSRHFNEPP 180 VVSCTDLIPI PQISNEPSPF PGMLIMDQDR PLVLDLAMTA ADHLVRMCNT TEPLWIRSGG 240 TTTVEVLDLE EHARMCPWPM ELKQQQGRFR TETSRDSAMV IMNSITMVDA FLDAAINRCM 300 QSCNFYLRWC PPVKLTSSGT ASRTQKKALG LWSTSPLMGS KKAFKAPSPG IEGGLLVVSS 360 KICPMGTQEI FLTLEVSLLP IHPRSPTLNC VAVLSSVYSA VSVISSPEAR KNMMRLSQRM 420 ITTFCTSVYA SGMQSWTALS DSSDDTVRVT TKKNTAPGQP NGVILTAVST TWLPFSHHQV 480 FELLTDEQRR SQIFLRAWVI PLAQAASNSS HSVDLLLQES STHPSGGSIV VYAAIDVDAV 540 QVAMSSEDPS YIPLLPTGFV ISPVARQPNV GTSSGGDGHA TVGCLLTVGM QVLATAVPSA 600 KLNLSTVTAI DNHLCNTVQQ VRAVLAGGTA TAEPAAVAPD R

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

MKLSQELGLK PRQIKFWFQN RRTQVKVRLQ SCSSTNNVTR IRSYSFVEES LLIRNCGTLQ  60
AQQDRADNVV LRAENESLKN DNFRLQAAIR NVVCPSCGGP AILSEMSFDE QQLRMENARL  120
KDEVLNPNPS SSQNDLERLP CVASRYSGRQ LQPLGPAPPV LLPSLDLDMG IYSRHFNEPP  180
VVSCTDLIPI PQISNEPSPF PGMLIMDQDR PLVLDLAMTA ADHLVRMCNT TEPLWIRSGG  240
TTTVEVLDLE EHARMCPWPM ELKQQQGRFR TETSRDSAMV IMNSITMVDA FLDAAINRCM  300
QSCNFYLRWC PPVKLTSSGT ASRTQKKALG LWSTSPLMGS KKAFKAPSPG IEGGLLVVSS  360
KICPMGTQEI FLTLEVSLLP IHPRSPTLNC VAVLSSVYSA VSVISSPEAR KNMMRLSQRM  420
ITTFCTSVYA SGMQSWTALS DSSDDTVRVT TKKNTAPGQP NGVILTAVST TWLPFSHHQV  480
FELLTDEQRR SQIFLRAWVI PLAQAASNSS HSVDLLLQES STHPSGGSIV VYAAIDVDAV  540
QVAMSSEDPS YIPLLPTGFV ISPVARQPNV GTSSGGDGHA TVGCLLTVGM QVLATAVPSA  600
KLNLSTVTAI DNHLCNTVQQ VRAVLAGGTA TAEPAAVAPD R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46880.1	6e-63	HD-ZIP family protein