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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW23575.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | bHLH | ||||||||
| Protein Properties | Length: 238aa MW: 26337.9 Da PI: 9.9498 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 21.8 | 3.5e-07 | 82 | 107 | 5 | 30 |
HHHHHHHHHHHHHHHHHHHHCTSCCC CS
HLH 5 hnerErrRRdriNsafeeLrellPka 30
h+++Er RR++i +++ +L+el+P++
RWW23575.1 82 HSIAERLRREKIAERMKNLQELVPSS 107
99**********************96 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 238 aa Download sequence |
MADGSIEKRD EARSDQLPLN TKDQLSAKAF SKKEKVGFDL IRWKQSEVGE TWWIIWVKVL 60 FGCNGAAKPR ARARRGQATD PHSIAERLRR EKIAERMKNL QELVPSSNKV SGSLLLSSSV 120 GKGGSDISES EDSLAFEQEV VKLMETNVTT AMQYLQNKGL CLMPIALATA ISNQKGFSTA 180 TPPDRRKPIP SHGMAPLSHS SMDRNCNKND VTGCNGTIVK QEARESNDKT RELDHKAK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G30980.1 | 2e-24 | bHLH family protein | ||||




