PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW23658.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ZF-HD

Protein Properties

Length: 660aa MW: 72311.1 Da PI: 6.8916

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW23658.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	101.9	4.3e-32	441	496	3	59
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 +vrYkeCl+NhAa +Ggh++DGCgEfmp+ ge +t+ alkCaACgCHR+FHR+e++ RWW23658.1 441 SVRYKECLRNHAAGIGGHVLDGCGEFMPE-GEPSTPGALKCAACGCHRSFHRKETDG 496 69************************8.8889*****************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MSSPERSPPP PPHNTPERPE SPEPAVTALA MAGQLSQDEL ADMVSVVDGG EDARAAGYGR 60 VSRKAENGLG SVPWSLRRRA VMRAALGLRV SAALLCLVSF SVMIADNTEG WAGDSFGRYS 120 EYRYELMFFS IRKLLADGPS HLKCGLVFWI FAEVYMSRHR AVFVSLLFGG CRCLVSVNAI 180 AFGYSAFHIY AKVHHVILKK YIIRSPINYY FDLTMDQILA YLLIAASSVA ASRNDLWMSR 240 FGSDEFMDMA NRERERERYD KERYVEEEEE IDGRKPNPKY HSLALPSHLS HCCRGGELGF 300 MEYKNQAAVV DEEEDDDDEE EEIELPSSTS VGYNPPPPPP PPIRGSAFSK PVLNPFSSLI 360 SPGRGGGGSG SGSSAARNSG FYGITTPSSV HPTTVAAIDH QVSLSVVWNS DPVAVGGATT 420 PDSKSTAAAR NSTSAATADV SVRYKECLRN HAAGIGGHVL DGCGEFMPEG EPSTPGALKC 480 AACGCHRSFH RKETDGDNEA TDPYYRVAAR PALLLPPPPQ HHHHHKQFPF GSPTTPSSAL 540 VAFGGNASAS GGTTTESSSE ERINAGAPTP ATVQRKRFRT KFTVEQKEKM LAFAERVGWR 600 IQKQDEAQVQ EFCAEAGVRR QVLKVWMHNN KHLFRKQQQT AHKDEPQSQQ HLHQPQPPQD

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MSSPERSPPP PPHNTPERPE SPEPAVTALA MAGQLSQDEL ADMVSVVDGG EDARAAGYGR  60
VSRKAENGLG SVPWSLRRRA VMRAALGLRV SAALLCLVSF SVMIADNTEG WAGDSFGRYS  120
EYRYELMFFS IRKLLADGPS HLKCGLVFWI FAEVYMSRHR AVFVSLLFGG CRCLVSVNAI  180
AFGYSAFHIY AKVHHVILKK YIIRSPINYY FDLTMDQILA YLLIAASSVA ASRNDLWMSR  240
FGSDEFMDMA NRERERERYD KERYVEEEEE IDGRKPNPKY HSLALPSHLS HCCRGGELGF  300
MEYKNQAAVV DEEEDDDDEE EEIELPSSTS VGYNPPPPPP PPIRGSAFSK PVLNPFSSLI  360
SPGRGGGGSG SGSSAARNSG FYGITTPSSV HPTTVAAIDH QVSLSVVWNS DPVAVGGATT  420
PDSKSTAAAR NSTSAATADV SVRYKECLRN HAAGIGGHVL DGCGEFMPEG EPSTPGALKC  480
AACGCHRSFH RKETDGDNEA TDPYYRVAAR PALLLPPPPQ HHHHHKQFPF GSPTTPSSAL  540
VAFGGNASAS GGTTTESSSE ERINAGAPTP ATVQRKRFRT KFTVEQKEKM LAFAERVGWR  600
IQKQDEAQVQ EFCAEAGVRR QVLKVWMHNN KHLFRKQQQT AHKDEPQSQQ HLHQPQPPQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24660.1	1e-50	ZF-HD family protein