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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW23708.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | GRAS | ||||||||
| Protein Properties | Length: 576aa MW: 61119.7 Da PI: 6.7854 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 320.8 | 2.8e-98 | 205 | 576 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
++ Ll+ A+a+ +g+le++ a La l+ a+p+gdp +Rl a+++ AL +rl++ +++ ++ p ++ + s e+++a+++++++sP++k+++++a +
RWW23708.1 205 RQILLDTATALGEGNLEAVMANLAVLKRAANPRGDPEHRLRAVMVAALLSRLNH--PQVGSSHPITDLR---SPEHFKATQMLYDLSPCFKLGFVAASS 298
689**************************************************9..9999999999998...99************************* PP
GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
aIlea++ e+++Hi+Df+++ G+Q++aLl aLa+R + pps+R+T+v++p+s + ++++g+r++++Ae+ gv+++f+v v+ r ++l+ +L
RWW23708.1 299 AILEATKDESKIHIVDFEVGLGGQYAALLLALAER-RCPPSIRVTAVADPSSPftniNIGDMRAVGDRIKNLAERAGVRLRFRV-VSLRAAELDAASLG 395
**********************************9.567**********99888999999***********************9.799*********** PP
GRAS 196 vkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293
++p +Eal+Vnl + l r++desvs +++rde+L+ v+ l+P++v ++eqe+++n++ F +r++ea+ +y al++slea +r s +r + E+ l+r+
RWW23708.1 396 CEPgEEALVVNLPFVLSRVPDESVSPDNPRDELLRRVRALRPHLVALAEQEINTNTAAFPARLAEACGHYGALLESLEAA-ARGSPDRGWAEAC-LARR 492
***999************************************************************************99.7********9987.9*** PP
GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv..lgWkdrpLvsvSaWr 374
+vn+va egaer+er+e ++kWr+r+++aGF+pvpl+ +++ +k+ ++ + + g++v+ee g l lgW++r L+++S Wr
RWW23708.1 493 AVNAVAREGAERVERCEVFGKWRARMSMAGFQPVPLGPAVVEPVKARVASTFsNPGFTVKEEAGGLAlgLGWMGRVLTVASTWR 576
*********************************************99987766*********999987899************8 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 576 aa Download sequence |
MASGFPGREL GLGGNGEGNL LKRTLLEMER QQMQHAILLR SVRLRTQAVP SVSMFDPVVG 60 GLSCNSSSAA APELMGSSLS SVDCSEPGFT ARTGLPPPVS ATATVNVAAP ESRSSGSMRD 120 QLRELERRLL LDEEEEAEAS APSGSAVTHA EWGEAIQRLI SPPPPLLPPA VSRPSPSPTD 180 SSSSTVSFAS CSPPSSLPSA PPPSRQILLD TATALGEGNL EAVMANLAVL KRAANPRGDP 240 EHRLRAVMVA ALLSRLNHPQ VGSSHPITDL RSPEHFKATQ MLYDLSPCFK LGFVAASSAI 300 LEATKDESKI HIVDFEVGLG GQYAALLLAL AERRCPPSIR VTAVADPSSP FTNINIGDMR 360 AVGDRIKNLA ERAGVRLRFR VVSLRAAELD AASLGCEPGE EALVVNLPFV LSRVPDESVS 420 PDNPRDELLR RVRALRPHLV ALAEQEINTN TAAFPARLAE ACGHYGALLE SLEAAARGSP 480 DRGWAEACLA RRAVNAVARE GAERVERCEV FGKWRARMSM AGFQPVPLGP AVVEPVKARV 540 ASTFSNPGFT VKEEAGGLAL GLGWMGRVLT VASTWR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G52510.1 | 1e-100 | GRAS family protein | ||||




