PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW23708.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 576aa    MW: 61119.7 Da    PI: 6.7854
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW23708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS320.82.8e-982055762374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++ Ll+ A+a+ +g+le++ a La l+  a+p+gdp +Rl a+++ AL +rl++  +++ ++ p ++ +   s e+++a+++++++sP++k+++++a +
  RWW23708.1 205 RQILLDTATALGEGNLEAVMANLAVLKRAANPRGDPEHRLRAVMVAALLSRLNH--PQVGSSHPITDLR---SPEHFKATQMLYDLSPCFKLGFVAASS 298
                 689**************************************************9..9999999999998...99************************* PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                 aIlea++ e+++Hi+Df+++ G+Q++aLl aLa+R + pps+R+T+v++p+s     +   ++++g+r++++Ae+ gv+++f+v v+ r ++l+  +L 
  RWW23708.1 299 AILEATKDESKIHIVDFEVGLGGQYAALLLALAER-RCPPSIRVTAVADPSSPftniNIGDMRAVGDRIKNLAERAGVRLRFRV-VSLRAAELDAASLG 395
                 **********************************9.567**********99888999999***********************9.799*********** PP

        GRAS 196 vkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293
                 ++p +Eal+Vnl + l r++desvs +++rde+L+ v+ l+P++v ++eqe+++n++ F +r++ea+ +y al++slea  +r s +r + E+  l+r+
  RWW23708.1 396 CEPgEEALVVNLPFVLSRVPDESVSPDNPRDELLRRVRALRPHLVALAEQEINTNTAAFPARLAEACGHYGALLESLEAA-ARGSPDRGWAEAC-LARR 492
                 ***999************************************************************************99.7********9987.9*** PP

        GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv..lgWkdrpLvsvSaWr 374
                 +vn+va egaer+er+e ++kWr+r+++aGF+pvpl+  +++ +k+ ++ +  + g++v+ee g l   lgW++r L+++S Wr
  RWW23708.1 493 AVNAVAREGAERVERCEVFGKWRARMSMAGFQPVPLGPAVVEPVKARVASTFsNPGFTVKEEAGGLAlgLGWMGRVLTVASTWR 576
                 *********************************************99987766*********999987899************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    
MASGFPGREL GLGGNGEGNL LKRTLLEMER QQMQHAILLR SVRLRTQAVP SVSMFDPVVG  60
GLSCNSSSAA APELMGSSLS SVDCSEPGFT ARTGLPPPVS ATATVNVAAP ESRSSGSMRD  120
QLRELERRLL LDEEEEAEAS APSGSAVTHA EWGEAIQRLI SPPPPLLPPA VSRPSPSPTD  180
SSSSTVSFAS CSPPSSLPSA PPPSRQILLD TATALGEGNL EAVMANLAVL KRAANPRGDP  240
EHRLRAVMVA ALLSRLNHPQ VGSSHPITDL RSPEHFKATQ MLYDLSPCFK LGFVAASSAI  300
LEATKDESKI HIVDFEVGLG GQYAALLLAL AERRCPPSIR VTAVADPSSP FTNINIGDMR  360
AVGDRIKNLA ERAGVRLRFR VVSLRAAELD AASLGCEPGE EALVVNLPFV LSRVPDESVS  420
PDNPRDELLR RVRALRPHLV ALAEQEINTN TAAFPARLAE ACGHYGALLE SLEAAARGSP  480
DRGWAEACLA RRAVNAVARE GAERVERCEV FGKWRARMSM AGFQPVPLGP AVVEPVKARV  540
ASTFSNPGFT VKEEAGGLAL GLGWMGRVLT VASTWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-100GRAS family protein